Our First Die Off

In our planet’s history there have been multiple periods of mass extinctions, Die Offs, where changes in environment or atmosphere or something cause a significant percentage of life on the planet to disappear.

I guess I wouldn’t want Alpha to be different as it is supposed to teach us what life (and the history of life) could look like on a different planet.

But it is still hard to see the Alphans (so many types of slugs!) disappear. To Janice it is like watching pets die, for Adit it is like knowing the code you worked so hard on was removed in beta; I’m not sure what it is for me except that it leaves me cold. I don’t want these things, bits of data, to die.

But they are.

First it was what should be one of the hardiest form of life, bacteria. Strains of this and strains of that started dying off and we didn’t notice until we started comparing the life count summaries we get at the end of each day.

Then we slowed down the simulation a tad so we could see in more detail what was happening. You’d think the die off would move up the food chain if it started with the bacteria, but then larger species far removed in the food chain started dying off, and then a variety of grasses. The cause and effect is impossible to track.

But track it is why were doing all of this.

Adit and Alice are leading most of the development team in going over the code in greater detail to make sure this isn’t a software bug (how awful it would be to find out that this pivotal moment in the history of Alpha is an error in some routine). So far nothing seems wrong, just as with the invertebrate issue, this seems to be part of Alpha’s evolution.

Kaitlin and Janice have been going through the snap shot archives of Alpha to see if there were any earlier signs of chemical changes in the atmosphere that we might have missed. The snapshots are hard archives of a moment in time in Alpha. Alpha is just too huge and memory intensive to record so every ten minutes of real runtime a moment in time is frozen and stored. Given that our simulation speeds have varied from real time to as fast as the servers can go, the snapshots capture intervals as short as ten minutes up to hundreds of thousands of years in Alpha time.

The tricky thing is that the snapshots are literally of what was, and as much of what Alpha is, is various algorithms unfolding, interacting, and rewriting themselves with a touch of randomness. So though it is Alpha’s past if Alpha started again from there (then?) the present Alpha we see might not be the Alpha that unspools. i.e. that past could lead to infinite versions of the present. Statistically they’d average out to be the same, but tell that to the dead slugs.

So far it looks like this was the natural evolution of the planet but we’ll continue looking into it. Like I said, Earth has gone through many such die offs in its history, so this maybe just be the first for Alpha, but it is awful to watch the list of extinct Alphans fly by on the screen.

One nice thing is that Alice has updated her NetTat to a still Mickey Mouse. I guess she realized the animated evolution tattoo she had on her arm earlier the week wasn’t in good taste once the die off started to happen.

Orexinal

I’m afraid to go back to sleep now. I feel like a child afraid of nightmares. But I’m afraid of dreams. I’m afraid of even a moment of not being conscious. A moment of not being in control. I think there is even a tinge of the classic “what if I don’t wake up” fear, but it’s more of “how long will I sleep” fear. Will it be days?

And gosh durn it, I get so much done never going to sleep.

I know at some point I need to stop taking Orexinal. Alpha is up and running, Adit is up and being Adit, and I even have a personal life! I don’t need to always stay awake.

There is nothing more I want than to wake up next to Janice, but there is nothing more frightening to me right now than the idea of being asleep.

Fear wins.

With Kaitlin and Adit using some of my Orexinal supply I’m beginning to run low. And I’m starting to get really anxious about it.

I’ve checked with the campus pharmacy and they’re all out, and not expecting more for at least a few weeks. The strikes have disrupted a lot of the supply chain.

The Good News is Alice has a contact in town that can get me a couple of months supply, the bad news is that he is pricey and outside the green zone.

Oh well. Field trip!

Our Study of Life – Saving Lives

Down on Alpha an amphibian species (mega toads really) started getting wiped out by an auto-immune virus. Not a big deal in itself because we’ve had thousands of species develop millions of diseases by now.

What was interesting was that the mega toads (officially we’ve been naming everything with 16 alpha-numeric codes that note their evolutionary tree and closest real world sister species, but that is not really good for conversation – mega toad is what we call these guys) evolved a defense mechanism that basically out-evolved the disease.

The toad’s immune system adapted to host a virus. A case of endosymbiosis, this virus would not attack the toad nor would the toad’s immune system attack it. The virus “lived” by using the auto-immune virus as the building block to replicate itself. A virus of a virus. Now my understanding is that the definition of a virus is that it is dormant until it is inside a cell, so this mega toad hosted virus killing virus isn’t really a virus. It is something new.

Though Janice’s people pour over all the data coming out about Alpha’s life forms and their evolutionary turns, but there is just so much detail, luckily Adit’s got multiple agents in the code to scan for the evolution of bacterias and viruses and flag any evolutionary path that isn’t following the standard lifespan bell curve. That’s how this was caught.

The biology team had no problem convincing me that the simulation should be slowed down to near real time so that this could be studied in more detail. It really seems that this virus killing virus (and yes we do now call it VKV) could be engineered in the real world. We could cure scores of diseases.

Hitting the Fan

At six this morning Ned ran into my office absolutely livid. He was a mess. It looked like he came into the lab right out of bed. And basically he had. He got an early morning visit from a Greystle lawyer.

Ned ranted about how the project was not only going to stop but that I and the whole team was going to go to jail.

What the hell?!?

“Rule Number 1 Rob, Rule Number 1 – Don’t screw the money!” Ned said that every ten minutes for most of the morning.

Someone in the biology team was so excited about the medical possibilities of the VKV that they sent some of the info to some medical students. They went outside the team.

Greystle found out about it instantly. What idiot on our team would put project data on the grid? It doesn’t matter if it was encrypted, that is a fantasy now anyway with every key owned by the government. And now I guess we could say Greystle owns them too.

When Ned ran to meet with Greystle’s lawyers I called all the managers to the main floor. Adit, Janice, Kaitlin, etc. Every group manager was there and I let them have it. I asked them if their CVs were up to date because they were going to need them soon. I was shaking. I think I might have been crying.

I told them that Alpha would most likely die and that Ned was trying to save our asses.

And then it got worse.

Janice just stared at me coldly and said “you would kill them all. All the animals, all that life. You’d kill them all for Greystle?”

I always thought the phrase “the silence was deafening” was crap, but I swear my eardrums were bleeding while all of us just stood there. No one shuffled. No one cleared their throat. A lot of death to think about, and inside I screamed as I thought of what Janice must now think of me.

When I finally spoke again I took a more conciliatory tone. I said that if Alpha was going to continue we’ve got to work better with Greystle. If the VKV is going to be used in medicines and save lives in the REAL world we’d need to work with Greystle or else what we learned here could never be used to help anyone.

I then ordered Pizza. That seemed to help a bit. But there was almost no small talk as we ate. Janice wouldn’t look at me.

During lunch Ned came in with somewhat good news. Alpha would live.

Ned convinced Greystle that the mistake would not be repeated and that Alpha was a proven money maker that could not exist nor be maintained without the present project team.

So now as it stands nothing has changed except that if any of us leaves the green zone we are instantly off the project and possibly even instantly put it jail.

We also lost our write access to the grid.

Okay, this is embarrassing to admit, but I didn’t know it was possible to that. I’m sure Adit will figure out a work around, otherwise half the team will lose their entire social life.

So we’re now prisoners of the campus and the green zone. Just as well I guess, none of us ever left… really. I mean at least now our campus pharmacy is fully stocked of Orexinal. Of course even if I didn’t take some tonight I doubt I’d be able to sleep.

I’m pretty sure we’ll have to push back our “beg for more money” presentation to Greystle yet again.

Hitting the fan II – this time it’s personal

I look like crap, I feel like crap.

And tonight I go to sleep. I really have no choice. I’m locked into my room, and I’m not allowed out until after I wake up. And sleep I will, they took away my Orexinal.

They have Kaitlin in the other room acting as my guard. I wonder if they’ll slide me food under the door.

How could it have come to this? Pathetic sad little boy afraid to go to asleep. I am crap.

Earlier today I went to get some Mountain Dew and Twizzlers. I came back from the snack machine to find Alice, Adit, Kaitlin, and Janice in my office. Janice’s eyes were red and she wouldn’t look at me.

Alice noted that the whole group knew not only of my Orexinal habit but what I myself had read about it on the old web. It seems I’m not as good as I thought with the old browsers and I had left a cache of all the sites I visited on Alice’s cube.

Adit and Kaitlin apologized for not recognizing I had a problem because they had thought I had stop using when we had finished the “Rasa” project.
I tried to explain that it hadn’t affected me, and that was met with a strong rebuke. Examples of my failures were too easily given from handling Greystle and the VKV to my inability in getting additional funding.

Janice’s rebuttal hit home the most. “Really Rob? No effect?”

In an effort to relieve my pain Adit decided to increase my embarrassment with a question I couldn’t really answer. When was the last time I took a shower? I’m sure it was just a few days ago.

I tried to explain it was hard to get into a routine without really having a “morning routine” anymore.

When I started to get angry and a little aggressive Adit grabbed my arm, which made me scream out in pain. I hadn’t realized I had begun cutting myself. Late at night I guess. Perhaps I was trying to keep my body awake.

I tried to explain it to them even though I didn’t understand it myself. Janice left the room without talking to me.
I guess that is what an intervention is.

They let me across campus to my room. You’d think a person basically being dragged would grab attention, but the lawns now seem to be just a staging area for near riots between Prescott supporters and activists. No one noticed us.

God I am tired. I’m frightened, what if I don’t wake up? Will this be how Janice remembers me? How will she explain this to Sally?
My head hurts.

Hey Rob, Adit here.

A blog? I haven’t seen one of these since the Grid came up. Did you know one of my doctors had a Rasa blog going on when I was a kid? When I was tracking your web usage on Alice’s backup I looked it up and read it; it was like meeting an old elementary school friend. Well you know, I assume it would be like that, if I had any elementary school friends. Or if I went to elementary school.

So about your blog Rob, I was able to hack into it via the Grid. It looks like no one else has yet but just in case when you wake up I’m going to give you an old tablet pc that has all wireless connectivity removed from it. I figure that way no one can stumble on to it. That way you can keep updating this knowing Greystle can’t read it.

How ya doin’ Rob? Actually right now you’re snoring, I am five feet away from you. Since you were sleeping I figured this was as good a time as any to set up a bogus Grid account so you can get full write access again. I’ve already done all the other team managers. Tomorrow I’ll do the full alpha crew.

You and Janice huh? Well since I know your secrets I’m going to tell you a secret. Kaitlin and I have been an item since my upgrade.

And Rob. I think it is only a secret to you. You have been seriously missing things guy.

Anyway, about Kaitlin and I, when you wake up I do have something very cool to tell you.

Take care Rob, we’ve all been really worried.

Hey Rob – It’s still me, Adit

Okay, I was messing with some of your old equipment you have back here, seeing if there was anything Kaitlin can use, and I find another Orexinal stash.

Not cool. First thing when you get up we’re going to go through everything you’ve got – together. I won’t tell Janice – If you help me flush all your stuff.

Look, it’s really important you do right by yourself and your whole team when you wake up.

With what has happened with Greystle we aren’t just a project team anymore we’re comrades in arms, and we need you fearless leader. Ned isn’t one of us, you are.

So stop this crap! If you don’t this is all going to fall apart.

Catching up

Adit asked me today if I had been posting anything here, and I realized that since I woke up I hadn’t.

I guess with learning that Adit had discovered this blog took away a little of the fun for me. And now that it’s just on this old tablet it seems less like a blog and more just some text file.

But reading it over from the beginning earlier today made me realize I wanted to continue posting. I don’t want to forget these days working on Alpha.

So let me catch up: I’m awake now (sleep typing not being one of the side effects) and at night I go to sleep. Seems simple enough but just a few weeks ago that scenario terrified me.

The first “night” I slept for eighteen hours. When I woke up I was hungrier than I had ever been in my life. I rushed around eating every scrap of food I could find. When I sat down after eating I felt increasingly tired and worn. The idea of going back to sleep again and so soon was frightening. I began searching for some Orexinal. Instead all I found were notes from Adit listing all the things I now owed him.

“Sorry Rob, but I found them first. You owe me a coke – Adit”
And
“Nope – you owe me a weekend without you guys calling.”
Etc.

I basically am going to have to take Adit out to the nicest restaurant in the green zone

I quickly gave up searching and headed towards the bed. I barely made it.

Sixteen hours later I was awake again and starving.

Having no food left at my place I headed down to the campus cafeteria. As I walked to a table I passed some guys from Alpha’s geology team and they grew quiet as I walked by.

I was devastated. I think that was when I realized how much damage I had done to myself and to the project as a whole. I wanted to lead more than a team; I wanted the team to be a family. My family. Adit could be my brother. Janice could be my wife. Sally my daughter. But at that moment I realized that instead I was the drunk dad who almost ruined it for everyone.

I went straight back to my room. I was already having trouble walking and my head hurt. I was getting tired again, but I made sure to search everywhere to make sure every stash of Orexinal was found and flushed. I checked between the cushions and under the desk, I didn’t want one of those damn pills around.

As I start to drift off I left a semi coherent message for Adit asking him for yet one more favor. To search my office and make sure there weren’t any pills there for me to find.

And I told him I’d be in the office the next day ready to work a full day.

I was there the next day but a full day seemed beyond my abilities for nearly a week.

Catching up 2 – POV

When I got back to the office I thought the first thing I’d hear about was the status of Alpha, but instead it was about the subject I dread: Politics

There is some kind of court case against President Prescott going on and that seems to be the new excuse for an increase in crime in town and even in the green zone. The thing Adit and Kaitlin wanted me to know was that there was a curfew now in the green zone. They figured I wasn’t aware of that and I wasn’t.

The campus security is also especially twitchy now.

More importantly though Adit and Kaitlin let me in on their little secret: Using the tech that keeps Adit… umm… Adit (and not Rasa), they are able to share experiences.

They started working on this right after Adit got his upgrade.

If you want any proof that Orexinal was affecting my performance I think you need go no further than the fact that my two main technical resources had basically been working part time on the alpha project and full time on their own experiment, and I had no idea.

Much like how Kaitlin and Adit upgraded Adit so that all electrical activity is recorded and “played back” to trigger his memory, they now can record the specific frequencies of each brain reaction to stimuli and compare that to how another brain reacts to the same stimuli. They can then create a mapping table between the two.

The program would learn how I see blue, and it would learn how Adit sees blue. Then I could look at blue, and record my brain looking at blue and then upload that recording to Adit. He’d then see the blue. It isn’t a recording of the blue or even my brain’s reaction to the blue. It is my brain’s reaction to the blue mapped to Adit’s brain’s reaction to blue. It would be what I saw as if he saw it.

Adit and Kaitlin mapped different sensory experiences. Their reactions to colors, shapes, smells, sounds, lights, all were mapped. Then touch. And as they are intimate now… all touch. They can really “share the experience.”

So besides transsexuals it looks like if Hera and Zeus ever get into an argument about sex again they can ask Adit or Kaitlin rather than just relying on the answer Tiresias gave. And no, I did not ask either Kaitlin or Adit which sex enjoys sex the most. And given the difference in anatomy and thus the difference in neuron wiring to respond to feedback from said anatomy the shared experience can really only ever be an approximation.

Actually all sensations through this tech will just be approximations, but according to Adit even just watching TV from the point of view of the person sitting next to you blows away any sense of “self.” And coming from a man whose every memory is triggered by a computer program that is saying something.

Over some beers we discussed what to call this and though I personally thought Perceptitron was cool and retro, in the end we decided to call the tech POV (Point of View) and we decided not to tell Greystle… or anyone else.

Tatoos and Memories: Relationships

Alice has upgraded her NetTat so that she can update the imagery via a contact lens interface.

She’s using it like a mood ring.

Sometimes there is a happy kitty on her arm, next razor wire around her neck, then a simple tear drop on her face. And yes I actually saw that progression today, all within an hour. She must be exhausting in a relationship.

And relationships are something I’m starting to get back. I feel like I’m friends again with everyone here. It isn’t like it used to be but it is getting better. I have hope again, hope that we will again be a family.

Luckily the us vs. them mentality here has really made getting back into the fold fairly smooth. The Greystle folks keep to themselves, and we keep to ourselves.

Ned is almost officially a Greystle employee at this point. He is now known as “Ned in Bed,” because he is basically a Greystle lackey and will always take their side in any argument.

One relationship that hasn’t been restored is the only real relationship I had. Janice is keeping me at a distance. I’ve lost her trust. She’s coming to me about Alpha related issues now, so that is an improvement, but she doesn’t treat me like a friend… yet. I hope I can type yet.

One blessing is that I think the whole situation was kept from Sally who is the only person who treats me exactly the way they always had. She is a great kid. How a girl can be so normal with only geeky adults for friends is a mystery. But even she knows her mom and I are no longer together, but she never asks. Its like she just wants to be a kid and doesn’t want to know.

Now Kaitlin and Adit. That is a relationship that seems to be going well, and seems to be pretty public knowledge by now, especially since I’m asked about it by someone at the Coke machine every time I’m there. Which, now that I’m back to traditional caffeine for my sleep denying needs, is someplace I am often at.

Kaitlin actually opened up to me a little about the relationship. She told me how proud she was of Adit to even be in a relationship.

“He’s not like you and me Rob. Every time he sees me every memory he has of me is retriggered. There is no distance and no priority based on time. He remembers everything and forgets nothing. He remembers how he felt when he met me, how he felt when he touched me, he remembers how I looked on every day he saw me. My bad hair days, my inside out shirts, and every runny nose I had.”

I didn’t really get the significance until she hit me over the head with it.

“Rob, if I yell at him he will remember it forever. He will be both hurt and angry forever. Not only will it never be forgotten, it won’t weaken. It’ll be like it just happened. And every moment of anger towards me will always be there making him both angry and ashamed forever. You see Rob, by getting together with me he’s really put his heart on the line.

It’s weird. I feel a pride in having someone risk so much for me, but god Rob there is also this wall I have to have, a circuit breaker that is always there because there is this responsibility you know. I could hurt him forever.”

I would risk anything for Janice, and I feel like it’d risk everything. But Adit, he has no choice, he really is putting everything out there.

Though I have to say I feel like I’m just as ashamed whenever I see Janice now as I was six weeks ago as I stood there watching her look at the floor instead of at me as all my failings were aired. And for now I want that shame to feel fresh. I deserve to feel it.